CDS

Accession Number TCMCG066C17981
gbkey CDS
Protein Id XP_034595455.1
Location complement(join(4024326..4024374,4024445..4024578,4024662..4024731,4025410..4025493,4026150..4026325,4027211..>4027621))
Gene LOC117857079
GeneID 117857079
Organism Setaria viridis

Protein

Length 307aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034739564.1
Definition pre-mRNA-splicing factor SPF27 homolog, partial [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description Breast carcinoma amplified sequence 2 (BCAS2)
KEGG_TC -
KEGG_Module M00353        [VIEW IN KEGG]
M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K12861        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000974        [VIEW IN EMBL-EBI]
GO:0002218        [VIEW IN EMBL-EBI]
GO:0002253        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009870        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010204        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
CCGGCCCACGCACGACACACGGGCGGAGGCGGAGGCGGAGGCGGAGGCCAGCTCCAACTTCAAACCCACTTCTCGCCTCCGCCGCTTCCTCTTCCTCCTCCGCGCCGGCGCGACACCTTCCCTCTCTGTCCCGCCTGCGCCTCAGCTGCCGCCGCGATGGCCTCGTCGTCGGCGACGAGGGAGGTGCTCATGCTGGAGGCCCCGCCGCCGTCCGACCCCGCGCTGGCGCCGTGGCGCTCGCCGCCGGACGCGGAGGCCGTCGACGCGCTGCCCTACATCGACGGCGACTACGGCGACCCGGCGGTGAAGCGGGAGGTCGACCGCCTCGTCGAGGAGGAGATGCGGCGCGGGCAGCGCAAGCCCGCCGACTTCCTCCGAGACCTGCCCCCCGTCCCCACCGCCGGATTCGAGAATCATCCTATGCTTGCCAAAGAGTACGAACGAGTTAGGGCTGGTAAACCTCCTTTTATGTTAGATATGTCTCGCTATGGTTTGGAACCACCTCCAATGAACAAGAGGAATGATGTTGCTGCCTGGAGGCAGGCTCTACGGAATGCTCAGAGCCAGTTGCAGCATCAAATTATAAGGATAGAGAATCTTGAGCTTATGCTGAAATATGGTGTTGATGTTTGGAAGCTCCAGAACAGACAAATGGAATCAGTTCTGTCTAGGATGCAAAAGACAGCTGTCGAATACAATGAAAAGATAGAGACCGTCAATCGTGAGAGGAAGTTCCACCAGCAAAACACTGGAGGACAGCTCCATGCCCTGACAATGGAATGGCAGGAGCTGTGTCAGAAGAATATAGCTATTGAGGCTGCCTGTGTTGACTTGCAGAATCATATTGATCAGCTTAAACTTGAAGCAGAAGAACTGGGAATGCCCATGGAAGACCACACTGGAACCAATTCACAAGCATCATGA
Protein:  
PAHARHTGGGGGGGGGQLQLQTHFSPPPLPLPPPRRRDTFPLCPACASAAAAMASSSATREVLMLEAPPPSDPALAPWRSPPDAEAVDALPYIDGDYGDPAVKREVDRLVEEEMRRGQRKPADFLRDLPPVPTAGFENHPMLAKEYERVRAGKPPFMLDMSRYGLEPPPMNKRNDVAAWRQALRNAQSQLQHQIIRIENLELMLKYGVDVWKLQNRQMESVLSRMQKTAVEYNEKIETVNRERKFHQQNTGGQLHALTMEWQELCQKNIAIEAACVDLQNHIDQLKLEAEELGMPMEDHTGTNSQAS